Education:

• PhD, Computer Science, University of Houston, 1996
• MS, Computer Science, University of Houston, 1988
• MS, Chemistry, University of Houston, 1985
• BS, Chemistry, Western Washington University, 1982

Teaching:

• Bioinformatics
• Parallel Computing

Service:

Research:

• Bioinformatics
• Data Management
• Parallel Computing

Affiliations:

Memberships:

Honors:

Selected Publications:

• Piotr Bala, Terry Clark and L. Ridgway Scott, Application of Pfortran and Co-Array Fortran in the Parallelization of the GROMOS96 Molecular Dynamics Module, Scientific Programming, 9(1):61–68, 2001.
• Douglas Kyung Nam, Sanggyu Lee, Guolin Zhou, Xiahong Cao, Clarence Wang, Terry Clark, Jianjun Chen, Janet D. Rowley, and San Ming Wang, Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription, Proc. Natl. Acad. Sci. (USA), 99(9):6152-6156, 2002.
• Sanggyu Lee, Terry Clark, Jianjun Chen, Guolin Zhou, L. Ridgway Scott, Janet D. Rowley, and San Ming Wang. Correct Identification of Genes from SAGE Tag Sequences, Genomics, 79(4):598-602, 2002.
• Terry Clark, Sanggyu Lee, Ridgway Scott, and Sanming Wang, Computational Analysis of Gene Identification with SAGE, Journal of Computational Biology, 9(3):527-540, 2002.
• Guolin Zhou, Jianjun Chen, Sanggyu Lee, Terry Clark, Janet D. Rowley, and San Ming Wang, book chapter in "Perspectives in Gene Expression," Edited by Krishnarao Appasani, BioTechniques Press, 2003.
• L. Ridgway Scott, Terry Clark, and Babak Bagheri, “Education and Research Challenges in Parallel Scientific Computing,” International Conference on Computational Science (ICCS) 2005, Emory University, Atlanta, GA, May 22-25, 2005.
• Sanggyu Lee, Jingyue Bao, Guolin Zhou, Joshua Sahpiro, Jinhua Xu, Run Zhang Shi, Xuemei Lu, Terry Clark, Deborah Johnson, Yeong C. Kim, Claudia Wing, Charles Tseng, Min Sun, Wei Lin, Jun Wang, Huanming Yang, Jian Wang, Wei Du, Chung-I Wu, Xiuqing Zhang, and San Ming Wang, Detecting Novel Low-level Transcripts in Drosophila, RNA, Cold Spring Harbor Laboratory Press, 11:939-946, 2005.
• Jingue Bao, Sanggyu Lee, Chen Chen, XiuQing Zhang, Yu Zhang, SiQi Liu, Terry Clark, Jian Wang, MengLiang Cao, HuanMing Yang, San Ming Wang, and Jun Yu, Serial Analysis of Gene Expression Study of a Hybrid Rice Strain (LYP9) and Its Parental Cultivars, Plant Physiolology, 138(3):1216-31, July 2005.
• Terry Clark, Josef Jurek, Gregory Kettler, and Daphne Preuss, “A Structured Interface to the Object-Oriented Genomics Unified Schema for XML Formatted Data,”Applied Bioinformatics, 4(1):13-24, 2005.
• Robert J. Swanson, Terry Clark, and Daphne Preuss, Expression Profiling of Arabidopsis Stigma Tissue Identifies Stigma-Specific Genes, Sexual Plant Reproduction, Oct. 2005, pp. 9-16.

Patents: